Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKSFKVALAQFSPHIGNIDSNTQKMIEQANQAKKQDADLIIFPELSVIGYPAEDLLLRPNLNKR-MQKAFAQLSEVKDIVMVFGFVNQTEDGQRYNSAAVMKDGQVLGVFNKHNLPNYGVFDEKRYFQKGHQHLVFEYLGH----------------KFGVLICEDIWSINTVKQLSQLNVDTVLVLN--SSPYEVGKPQHRKQTLSELAKQLHLNTVYVNQVGGQ-DDLIFDGTSFVSNQNGEIALQAP-SFKE-DLYIAEFDRDTKLYKVVESAPALETFAEIYQGLVMATRDYVERSGFPGVILGLSGGIDSALTLAIAVDAI----------------------------------GAERVQAVMMPYTYTSQISVED-----AAEQARRMGVTFGIAEIHSIVNSFMQTL-----YPFFGNSPADATEENLQARARGTLLMGLSNKFGNLVLSTGNKSELSVGYCTLYGDMVGGFAVLKDVYKTIVFELAKY--RNSLSETPVIPERVITRPPSAELRPDQKDQDSLPAYDVLDAILYAYIEEDLGQADI---------IAKGFDKEVVEKVIRLVDRNEYKRRQGA---------IGPR------ITSRAFSRERRYPIVNGWTAND
3ILV Chain:A ((17-618))----------------DWENNVKNILDAIEEAKNANVEILCLPELCITGYGCEDLFLTDWVAETAIEYCFEIAASCTDITVSLGLPMRIA-GITYNCVCLVENGIVKGFSAKQFLANEGVHYETRWFTAWPRNHTTTFLYNDVKYPFGDVLYNVKDARIGFEICED-----------HYEKGATLVLNPSASHFAFGKSAIRYDLVIGGSERFDCTYVYANLLGNEAGRMIYDGEVLIAHKGKLIQRNDRLSFKNVNLIYADIAT-------------LEKEFEFWEATSLGLFDYMRKSRSKGFVLSLSGGADSSACAIMVAEMIRKGLKELGLTAFLQKSNMETLFDLPALQHLPFEEQAKKITAVFLTTAYQSTRNSGDETYTSAKTLAESIGATFYNWSVDEEIEQYKATIENVIERPLTWEKD-DITLQNIQARGRAPIIWMLTNVKQALLITTSNRSEGDVGYATMDGDTAGGIAPIAGVDKDFIRSWLRWAEKNRNQHGLHIVN-------------------DLMPYDVLARIERKAIKERLSPVQVYTALLTEGPYTKNEFKYWVKKFFRLWSINQWKRERLAPSFHMDDFNIDPRSWYRFPILSSGFAKE-------------


General information:
TITO was launched using:
RESULT:

Template: 3ILV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2505 -16055 -6.41 -34.38
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -6.41
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.396

(partial model without unconserved sides chains):
PDB file : Tito_3ILV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3ILV-query.scw
PDB file : Tito_Scwrl_3ILV.pdb: