Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQRQLVSSSRVEQKNWDR-------PVLSEWIEQFVNTVQAVQ-TPVQIVAHSFGCLTSVAALAEHPELQLQVKKLILVAPANPARFGEA-----------------------------GFA--RH----------SLTDY---K-------------D---------YF-------HQ--LKINVPATLLISENDPWLDFFDALQLAKSW-QLTPINLGQVGHINVASGFGPFPDLLNHLLPEDSMCSHSSIDPVKTHFSLKFA
4K2A Chain:C ((53-295))------HCIAPDLIGYGQSGKPDISYRFFDQADYLDALIDELGIASAYLVAQDWGTALAFHLAARRP---QLVRGLAFMEFIRPMRDWSDFHQHDAARETFRKFRTPGVGEAMILDNNAFVERVLPGSILRTLSEEEMAAYRAPFATRESRMPTLMLPRELPIAGEPADVTQALTAAHAALAASTYPKLLFVGSPGALVSPAFAAEFAKTLKHCAVIQLGAGGHYLQEDHPEAIGRSVAGWIAGIEAASAQR-------------


General information:
TITO was launched using:
RESULT:

Template: 4K2A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 547 -5812 -10.62 -36.55
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain C : 0.62

3D Compatibility (PKB) : -10.62
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.445

(partial model without unconserved sides chains):
PDB file : Tito_4K2A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4K2A-query.scw
PDB file : Tito_Scwrl_4K2A.pdb: