Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSLLNHFATELDELKQQGNFRQFTQNVQHGRFITIQNKTMLNLASNDYLGLAAD---INLRQEFLDSYPLERSYFSSSSSRLLTGNFDEYEQLENSLSQAFSGRAALLFNSGYHMNIGILPAVADSKTLILADKLVHASMIDGIRLSGAQYVRYRHNDLQHLEQLLQKYHDDDQIERIIVVTESIFSMDGDETDLTALVQLKKRFAKTMLYVDEAHSIGVRGQQGLGCAEQYNVIQEIDFLVGTLGKALAAVGGYIICDQIIKDYLINKMRPLIFSTAQPPIVMAWANFIFKKVLMAQS-----QREHLKNISQYLQQAVVQKGY-VSPSTSHIIPVIVGESQATIDKAKQVQESGFYAMPVRPPTVPKNSSRLRISLTSMVEQHELEALVSFL
1DJE Chain:A ((31-380))-----------------------------GRWLVADDRQYLNFSSNDYLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVV-----HQALEEELAEWLGYSRALLFISGFAANQAVIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRFAHNDVTHLARLLASPCPGQQ----MVVTEGVFSMDGDSAPLAEIQQVTQQH-NGWLMVDDAHGTGVIGEQGRGSCWLQKVKPEL--LVVTFGKGFGVSGAAVLCSSTVADYLLQFARHLIYSTSMPP---AQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDLPFTLADSCSAIQPLIVGDNSRALQLAEKLRQQGCWVTGIRPPTVPAGIARLRLTLTAAHEMQDIDRLLEVL


General information:
TITO was launched using:
RESULT:

Template: 1DJE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1992 -41281 -20.72 -121.06
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : -20.72
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.521

(partial model without unconserved sides chains):
PDB file : Tito_1DJE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1DJE-query.scw
PDB file : Tito_Scwrl_1DJE.pdb: