Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTDALVLRDLSKTYRNGFQALKGINLTVPEGEFYALLGPNGAGKSTTIGIISSLTKKTSGTVEIFGHNLDTHPS-----LAKQQLGVVPQEFNFGQFE-KAFDILVTQAGYYGIHRKIAEKRAEHYLEKLGLWEKRNIQARMLSGGMKRRLMIARAMMHEPKLLILDEPTAGVDIELRRSMWDFLTEMNENGTSIILTTHYLEEAEMLCRQIAIIDRGVIKEDTSMKSFLNQLSEESFIFDLAEPIAPLQLNIIGVKFNLIDGSTLEVTMDKAHTLNDLFQLLESQGIRVRSMRNKSNRLEELFVKMVEKNLEGAAK
2PCL Chain:A ((2-224))-AEILRAENIKKVIR-GYEILKGISLSVKKGEFVSIIGASGSGKSTLLYILGLLDAPTEGKVFLEGKEVDYTNEKELSLLRNRKLGFVFQ-FHYLIPELTALENVIVPMLKMGKPKKEAKERGEYLLSELGLGDKLSRKPYELSGGEQQRVAIARALANEPILLFADEPTGNLDSANTKRVMDIFLKINEGGTSIVMVTHERELAELTHRTLEMKDGKVVGEITRV-------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2PCL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1118 -9377 -8.39 -43.21
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -8.39
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.474

(partial model without unconserved sides chains):
PDB file : Tito_2PCL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PCL-query.scw
PDB file : Tito_Scwrl_2PCL.pdb: