Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKMSEKYQVTKKDLRKANYRWLMSVCTFNYQTQQGASVTYALSPILRKLYKDD----D-EYIEALNNHFQYYNTQPWLAAIILGACVAMEEKQGLEAKDAINDFKVGTMGPIAGIGDSLLMTMIPTIMGSIAAYMALENNPVGIFLWFILIMVIFFFRMRGFEFGYKQGMKIVTEYGEKINYLTEAASVLGLTVVGSLIASVISVSTPLKFTFGEVSMKIQPMLDKILPTLIPVIITAAAYYLLSKKKISMTILILLVIVFAMVMAAFGILA
2DO5 Chain:A ((6-42))-------------------------------------------AQELQAKLAEIGAPIQGNREELVERLQSYTRQTGIVL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2DO5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 60 1946 32.43 60.81
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.40

3D Compatibility (PKB) : 32.43
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.40
QMean score : 0.701

(partial model without unconserved sides chains):
PDB file : Tito_2DO5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2DO5-query.scw
PDB file : Tito_Scwrl_2DO5.pdb: