Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMISIIWFLFFFIFFSYLKVIKIDSFLVYHTSAMKNLTQNLLKKDNSSILKIELKKENNKSMKISKKAFLLVVLILLSTLYSVNFMRNAQEIYTTGDLSFHLSRIKGLSSIFEGPINYTTFNNYGDGLNYFYPFLTIIPAVVFYGISNNLILSYVLYIWLLNICTILISFWERQ
5NW5 Chain:A ((975-1029))--------------------------------------------------------------------------------------------------LHLAMANPIEPLFSGLLNFCIKNNMADHLDEFCGNMT---SEVLFKISPELLLKLLTY-----------------


General information:
TITO was launched using:
RESULT:

Template: 5NW5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 112 -26713 -238.50 -485.68
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.52

3D Compatibility (PKB) : -238.50
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.52
QMean score : 0.202

(partial model without unconserved sides chains):
PDB file : Tito_5NW5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5NW5-query.scw
PDB file : Tito_Scwrl_5NW5.pdb: