Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNGFMDKLSEKIMPLANLLGQNRYLTVLRDAFMLSFPLTMFGSIVVVINNLPF--FSDAT----KGTLSNLFGNGQNATMSIMSVFVTFGIGYYLSKSYDVEGIFGGAVSFASFLILTPFAMKTAGG--E---DVTGVLSLDRLGAKGMFIGMIAAFLAGEIYCRITKRGWQIKMPDGVPPAVTKPFAALIPAVVTLTIFLVINAVMTGIFNANLHDVVYEVIQKPLTGLGSSLPATLIALFFVQFLWFFGLHGQIIVNSVMDPIWNTLMLDNLEAYQHGKELPHIITKPFMETFTVGIGGSGMTLAVVLLMAFVLKKKQYRDVGRLALAPGIFNVNEPAIFGLPIVLNATILIPWVVAPLIVTTFNYLVMAAGLVPAPT-GVSVPWTVPIIASGVLATN-SWLGGMLQVIDFVIVAFIWYPFLKVLDKQPDLDIA
3QNQ Chain:A ((3-431))-----RFLEKYVMPVAGKVAEQRHLLAIRDGLVLTMPFLIIGSIFLIISTLPIPGYSEFMASLFGKNWNVALGYPVSATFNIMALIAVFGIAYRLGEYYKVDALASGALSLVTFLLATPFQVAYIMPGTKESILVDGVIPAALMGSQGLFVAMIIAIISTEIYRFLVQKKMIIKMPETVPPAVTRSFAALIPGFIVVTVVWIIRLIFEHTTFGSIHNVVGKLLQEPLSILGASLWGAVIAVILVHVLWACGIHGATIVGGVMSPIWLSLMDQNRIAFQAGQDVPNTITAQFFDLWI-YMGGSGATLALVVGMLLFARSQQLKSLGRLSIAPGIFNINEMVTFGMPIVMNPLLLIPFIVVPVVLTIVSYFAMEWGLVA-RPSGAAVTWTTPILFSGYLGSGGKISGVILQLVNFALAFVIYLPFLKIWDKQKIAEEK


General information:
TITO was launched using:
RESULT:

Template: 3QNQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2077 -248185 -119.49 -596.60
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.83

3D Compatibility (PKB) : -119.49
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.355

(partial model without unconserved sides chains):
PDB file : Tito_3QNQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3QNQ-query.scw
PDB file : Tito_Scwrl_3QNQ.pdb: