Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMHKGWSGHFFCAQNEKGSEKMAEITLEFDTIAAISTPPGEGAISIVRLSGDQAVQLADKVYQSGNKRLSEVPSHTIHYGHIVDPKSNQLVDEVMVSVMRAPKTFTREDVVEINCHGGIVVVNQILQLLLREGARLAEPGEFTKRAFLNGRVDLSQAEAVMDLIRAKTDKAMGLALNQLDGNLSALIRSLRQEILETLAQVEVNIDYPEYDDVEELTTKLLLEKAQMIQQRIQALLATSKQGKVLREGLSTAIIGRPNVGKSSLLNHLLREEKAIVTDIAGTTRDVIEEYVNVRGVPLKLIDTAGIRETEDVVERIGVERSRKALAEADLILLVLNQS-----EPLTAEDEQLLEATSGLKRIILLNKTDLPAQLEQEKLKKLIENEPVFSISVAKNDGLDRLESAISDLFFSGETGERDATYVSNTRHIALLEKASLSLEEVIAGIDSGMPVDLVQIDMTRCWDYLGEVVGDSVQDELITQLFSQFCLGK
2GJ9 Chain:A ((4-130))------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GMKVVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLREASDEVERIGIERAWQEIEQADRVLFMVDGTTTDAVDPAEIWPEFIARLPAKLPITVVRNKADITGE---------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2GJ9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 556 -28414 -51.10 -232.90
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : -51.10
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.447

(partial model without unconserved sides chains):
PDB file : Tito_2GJ9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2GJ9-query.scw
PDB file : Tito_Scwrl_2GJ9.pdb: