Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIGIDRLSFFIPNLYLDMTELAESRGDDPAKYHIGIGQDQMAVNRANEDIITLGANAASKIVTEKDRE--LIDMVIVGTESGIDHSKASAVIIHHLLKIQSFARSFEVKEACYGGTAALHMAKEYVKNHPE--RKVLVIASDIARYGLASGGEVTQGVGAVAMMITQNPRILSIEDD-SVFLTEDIYDFWRPDYSEFPVVDGPLSNSTYIESFQKVWN--RHKELSGRGL---------EDYQAIAFHIPYTKMGKKALQSVLDQTD--------------EENQERLMARYEESIRYS----RRIGNLYTGSLYLGLTSLLENSKSLQPGDRIGLFSYGSGAVSEFFTGYLEENYQEYLFAQSHQEMLDSRTRITVDEYETIFSETLPEHGECAEYTSDVPFSITKIENDIRYYKI
5HWQ Chain:A ((4-414))-RVGIEALAVAVPSRYVDIEDLARARGVDPAKYTAGLGAREMAVTDPGEDTVALAATAAARLIRQQDVDPSRIGMLVVGTETGIDHSKPVASHVQGLLKLPRTMRTYDTQHACYGGTAGLMAAVEWIASGAGAGKVAVVVCSDIARYGLNTAGEPTQGGGAVALLVSEQPDLLAMDVGLNGVCSMDVYDFWRPVGRREALVDGHYSITCYLEALSGAYRGWREKALAA-GLVRWSDALPGEQLARIAYHVPFCKMARKA-HTQLRLCDLEDAADAAASTPESREAQAKSAASYDAQVATSLGLNSRIGNVYTASLYLALAGLLQHEAGALAGQRIGLLSYGSGCAAEFYSGTVGEKAAERMAKADLEAVLARRERVSIEEYERLMK--LPADAPEAVAPSPGAFRLTEIRDHRRQY--


General information:
TITO was launched using:
RESULT:

Template: 5HWQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2418 418 0.17 1.11
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.81

3D Compatibility (PKB) : 0.17
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.422

(partial model without unconserved sides chains):
PDB file : Tito_5HWQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5HWQ-query.scw
PDB file : Tito_Scwrl_5HWQ.pdb: