Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMILLQANQIARHFGAEVLFENIHLEISTGARVALVGRNGAGKSTLLKIIAGIEAPDEGKIAKNKTATLGYLAQDTGLDSNETVWNEMLKAFE--QVRQMEERMRELEIFISEGTPDT-PAYSSYLKEYDRLQHDFSDRNGYGYENEIRSVLHGF----KFDS--------SFYDQKIDTLSGGQRTRLALARMLLQHPDILILDEPTNHLDIE---TLSWLENYLQSYTGALLIVSHDRYFLD---KVVNEVYELSR-----RKMRHYKGNYSKYLD--LKAEQLASEWKAYEKQQTEIHKLEDFVARNLVRASTTKRAQSRRKTLEKMDRLDRPQGDEKQANFLFSIEKPSGNVVLQIEDAAIGYDNVTLSEPINLDIRRQEAIALVGPNGIGKSTLLKSIIHQIPFIRGKETLGTNVTIGYYDQG-QADLHTNKTILAELWDEHPTTP---EKEIRSALGAFLFSGEDVEKPIPLLSGGEKARVALAKLAMNKENFLILDEPTNHLDIDNKEVLENALIDY----DGTLLFVSHDRYFINRIATKVVELSENGSKVYLGDYDYYLEKKQEEEEIAELLAQDEPESAPAPTNKSDYYQSKEQQKLIRSLQRKITQVEEEMARIDEWIDQLEQEMVAPENLEDHVKLNELNQDLEAARQDQETKLTEWEELSLELEEYEN
3J15 Chain:B ((100-529))-------------------------VKDGMVVGIVGPNGTGKTTAVKILAGQLIPN--------------LCEDN--DS----WDNVIRAFRGNELQNYFERLKNGEI-----RPVVKPQYVDLLPK--------------AVKGKVRELLKKVDEVGKFEEVVKELELENVLDRELHQLSGGELQRVAIAAALLRKAHFYFFDEPSSYLDIRQRLKVARVIRRLANEGKAVLVVEHDLAVLDYLSDVIHVVYGEPGVYGIFSKPKGTRNGINEFLQGYLKDENV--RFRPYEIRFTKL----------------SERVDVERETLVEYPRLVKDYGS-------FKLEVEPG------------------------EIRKGEVIGIVGPNGIGKTTFVKMLAGVEEPTEGK--VEWDLTVAYKPQYIKAEYEGTVYELLSKIDSSKLNSNFYKTELLKPLGIIDLYDRNVED----LSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLMEKNEKTALVVEHDVLMIDYVSDRLI-----------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3J15.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1771 54064 30.53 137.22
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain B : 0.70

3D Compatibility (PKB) : 30.53
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.394

(partial model without unconserved sides chains):
PDB file : Tito_3J15.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3J15-query.scw
PDB file : Tito_Scwrl_3J15.pdb: