Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMERFDVERMIQMKIFVVGANGQIGRHLIKDLAPSSHEIFAGVRDVASQTLVKKENVSYVSFDLTWSVEKMTEAFKGIDVLIFAAGSQGKNLLQVDLDGAIKTVIAAENAHVSRYLMVSAVYADEPAKWPESMTDYYITKHYADEW-LKRTNLDFVILQPVTLTNDEEVTSIQLTKPNEKASKTITRSTVAAVLAALVEETDISRTTLVLSEGSKELNTAFQEWAKEE
5L4L Chain:A ((22-157))------------KILVTGARGSIGSRVAGKLVERGLPVRGGVRDLAAPGL--PEGVEAVQADLTRP-ETLARALEGVD----------KVFLYTVPEGIAGFVDEARAAGVRHVVLLSSIA----VTWPDADRDPIGRMHLAVERPIEESGLGWTFVRPEALATN--------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5L4L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 653 -60403 -92.50 -447.43
target 2D structure prediction score : 0.45
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -92.50
2D Compatibility (Sec. Struct. Predict.) : 0.45
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.501

(partial model without unconserved sides chains):
PDB file : Tito_5L4L.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5L4L-query.scw
PDB file : Tito_Scwrl_5L4L.pdb: