Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEILIALVPMLAWGSIGLVSGKIGGDANQQTLGMTIGAFLFSLVVFFVVSPVITPWIFLIGFLSGLAWSVGQNGQFHGMKYMGVSVGLPLSTGFQLILNTIAGAVFFHEWTQTKDYVYGIIALALLVSGAYLTARQDDEGKIDTDNKMLDFGKGFRALIFSTIGYGVYTIIVNWANLDAMSIILPQSIGMILGASFFAFRKVKVDQFVWKNMICGLLWGLGNICMLLTVKSLGLAVGFSLSQMGIIISTLGGIFILGERKTKKELIYVIVGCLLVILGGILLGYMKTV
5H0M Chain:A ((39-130))---------------------------------------------------------------------------------------------------------------NDKEYDKHKRNQQARAFYHSREWERTRLAVLAKDNYLCQHCLKEKKITRAVIVDHITPLLVDWSKRLDMDNL--QSLCQACHNRKTAEDKRRYG-----------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5H0M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 274 -22127 -80.76 -240.51
target 2D structure prediction score : 0.46
Monomeric hydrophicity matching model chain A : 0.40

3D Compatibility (PKB) : -80.76
2D Compatibility (Sec. Struct. Predict.) : 0.46
1D Compatibility (Hydrophobicity) : 0.40
QMean score : 0.087

(partial model without unconserved sides chains):
PDB file : Tito_5H0M.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5H0M-query.scw
PDB file : Tito_Scwrl_5H0M.pdb: