Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFLLTGGNGQLGTEL-RHLLDEKNLQYVSTDAKDL--DITDAEKTMAYITELKPDVIFHCAAYTAVDKAEEEAKELDEKINVDGTRNVALAAKAVNAQFVYISTDYVFDGKNKNVEYEVDDQTNPLNEYGRTKLLGEKAVEEILEDYYIIRTSWVFGIYGHNFVFTMQRLAETRDKLTVVNDQFGRPTWTRTLAEFMVYVIE----EKAPFGIYHLSNENSCSWYEFAKEILKDTD--------VEVAPVTSEEFPQKATRPQYSVMSLKKTEE-LGFVIPTWQEALAQMLEAAKKMNK
1N2S Chain:A ((3-290))-ILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVNAAAHTAVDKAESE-PELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTG-DIPWQETDATSPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAGGTTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFDLILPQWELGVKRML--------


General information:
TITO was launched using:
RESULT:

Template: 1N2S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1501 -9304 -6.20 -34.20
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : -6.20
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.567

(partial model without unconserved sides chains):
PDB file : Tito_1N2S.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1N2S-query.scw
PDB file : Tito_Scwrl_1N2S.pdb: