Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEANMKHLKTFYKKWFQLLVVIVISFFSGALGSFSITQLTQKSSVNNSNNNSTITQTAYKNENSTTQAVNKVKDAVVSVITYSANRQNSVFGNDDTDTDSQRISSEGSGVIYKKNDKEAYIVTNNHVINGASKVDIRLSDGTKVPGEIVGADTFSDIAVVKISSE-KVTTVAEFGDSSKLTVGETAIAIGSPLGSEYANTVTQGIVSSLNRNVSLKSEDGQAISTKAIQTDTAINPGNSGGPLINIQGQVIGITSSKIATNGGTSVEGLGFAIPANDAINIIEQLEKNGKVTRPALGIQMVNLSNVSTSDIRRLNIPS----NVTSGVIVRSVQSNMPAN-GHLEKYDVITKVDDKEIASSTDLQSALYNHSIGDTIKITYYRNGKEETTSIKLNKSSGDLES
5FHT Chain:A ((12-326))----------------------------------------------------------RSQYNFIADVVEKTAPAVVYIEILDRHP----FL------GREVPISNGSGFVVAA---DGLIVTNAHVVADRRRVRVRLLSGDTYEAVVTAVDPKADIATLRIQTKEPL-PTLPLGRSADVRQGEFVVAMGSPFAL--QNTITSGIVSSAQR------L--PQTNVEYIQTDAAIDFGNAGGPLVNLDGEVIGVNTMKVT-------AGISFAIPSDRLREFLHR-------QRRYIGVMMLTLSPSI---LAELQLREPSFPDVQHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNAEDVYEAVR---TQSQLAVQIRRGRETLTLYVTPEVTE-----


General information:
TITO was launched using:
RESULT:

Template: 5FHT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1700 -32884 -19.34 -113.39
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : -19.34
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.519

(partial model without unconserved sides chains):
PDB file : Tito_5FHT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5FHT-query.scw
PDB file : Tito_Scwrl_5FHT.pdb: