Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIREVILDPSHTQMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWLNQFATDGLKPDLTLYFDIEVEEGLARIAANSDREVNRLDLEGLDLHKKVRQGYLSLLDKEGNRIVKIDASLPLEQVVETTNAVLFDGMGLAK
3HJN Chain:B ((2-181))-----FITFEGIDGSGKSTQIQLLAQYLEKRGKKVILKREPGGTETGEKIRKILLEEEVT---PKAELFLFLASR-NLLVTEIKQYLSEGYAVLLDRYTDSSVAYQGFGRNLGKEIVEELNDFATDGLIPDLTFYIDVDVETALKR---------NR--FEKREFLERVREGYLVLAREHPERIVVLDGKRSIEEI----------------


General information:
TITO was launched using:
RESULT:

Template: 3HJN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 860 -61032 -70.97 -346.77
target 2D structure prediction score : 0.82
Monomeric hydrophicity matching model chain B : 0.79

3D Compatibility (PKB) : -70.97
2D Compatibility (Sec. Struct. Predict.) : 0.82
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.524

(partial model without unconserved sides chains):
PDB file : Tito_3HJN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3HJN-query.scw
PDB file : Tito_Scwrl_3HJN.pdb: