Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTNSVFQGRSFLAEKDFTRAELEYLIGLSAHLKDLKKRNIQHHYLAGKNIALLFEKTSTRTRAAFTTAAIDLGAHPEYLGANDIQLGKKESTEDTAKVLGRMFDGIEFRGFSQRMVEELAEFSGVPVWNGLTDEWHPTQMLADYLTVQENF---GRLEGLTLVYCGDGRNNVANSLLVTGAILGVNVHIFSPKEL-FPEKEIVELAEGFAKESGAHVLITEDADEAVKDADVLYTDVWVSMGE-EDKFAERVALLKP-YQVNMDLVKKAGNENLIFLHCLPAFHDTHTVYGKDVAEKFGVEEMEVTDEVFRSKYARHFDQAENRMHTIKAVMAATLGNLYIPKV
4A8H Chain:A ((3-305))--------RDYVTTETYTKEEMHYLVDLSLKIKEAIKNGYYPQLLKNKSLGMIFQQSSTRTRVSFETAMEQLGGHGEYLAPGQIQLGGHETIEDTSRVLSRLVDILMARVERHHSIVDLANCATIPVINGMSDYNHPTQELGDLCTMVEHLPEGKKLEDCKVVFVGDA-TQVCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAKLAKN-CEVSGGSFLVTDDAS-SVEGADFLYTDVWYGLYEAELSEEERMKVFYPKYQVNQEMMDRAG-ANCKFMHCLPATRGE-----------------EVTDEVIDGKNSICFDEAENRLTSIRGLL------------


General information:
TITO was launched using:
RESULT:

Template: 4A8H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1588 -43978 -27.69 -148.07
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain A : 0.79

3D Compatibility (PKB) : -27.69
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.622

(partial model without unconserved sides chains):
PDB file : Tito_4A8H.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4A8H-query.scw
PDB file : Tito_Scwrl_4A8H.pdb: