Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKQFAVIGNPIEQSRSPELHHAFAEKTGVDLNYQKRLAPLDGFESSMRSFFAEGGSGMNVTVPFKEQAFALCNVLTERAQIAKAVNTLWMENGKLHGDNTDGQGLVAAIQA-LEWNLENTTILILGAGGATRGVIYPLVQAGAKKIVIANRTLARAEQLVDDLKTAVPQAQLQAISLN-DLEGDFDIVINATSASLSGDALQLPEKLK--FKYAYEMAYGK-PSSFLDQAKQRNV-PYAEGFGMLVGQAIEAFSIWNGVRPQLKDFL
3PWZ Chain:A ((2-263))-SDRYAVIGRPINHTKSPLIHGLFAQASNQQLEYGAIEGSLDDFEAQVLQFRSEGGKGMNITAPFKLRAFELADRRSERAQLARAANALKFEDGRIVAENFDGIGLLRDIEENLGEPLRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSR----LRISRYEALEGQSFDIVVNATSASLTADLPPLPADVLGEAALAYELAYGKGLTPFLRLAREQGQARLADGVGMLVEQAAEAFAWWRGVRPDTRAV-


General information:
TITO was launched using:
RESULT:

Template: 3PWZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1458 -63252 -43.38 -247.08
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.82

3D Compatibility (PKB) : -43.38
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.521

(partial model without unconserved sides chains):
PDB file : Tito_3PWZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3PWZ-query.scw
PDB file : Tito_Scwrl_3PWZ.pdb: