Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVIDFKQDILAPVATDFAAMDHLINEGISSKVGLVMSVSKHVVEAGGKRMRPIMCLLAARACGLDNMQNAQRLAAIIEMLHTATLVHDDVVDESGLRRGRPTANATWNNQTAVLVGDFLIARAFDLLVDLNNMTLLKDFSTGTCEIAEGEVLQLQSQHQPDTTEETYLKIIHGKTSRLFELATEGAAILAGQEA-YREPLRLFAGHFGNAFQIIDDILDYTSDAETLGKNIGDDLMEGKPTLPLISALAHSTGEEHA---IIRRSIATGGVDQLPKVIEIVQKSGALDYCQRRAQEETEAALQALSILPDTPYRQALINLTRLALHRIQ
4JYX Chain:G ((22-344))--SMDLDHILSLAEPDMLAVNQLIQKQVNSDVSLINQLGFYIVNSGGKRLRPLLTVLAARALNIQT-EQHHTLAAIIEFIHTATLLHDDVVDESTMRRGRETANEVFGNQASVLVGDFLYTRSFQMMVTLDSMRVMQILSDATNVIAEGEVLQLMNCNDPDTTEESYMEVIYSKTARLFEAATLLAGVLTKQSEAIENAMQDYGKYLGTAFQLVDDIMDYAS-------NMGDDLAEGKPTLPLLYAMWHGNEQQTAIIREAIETG--NGMDNLTPILETMEQTGALTYTKQQALKASQQAIDALSPIEESVYKEALIGLAHISVERV-


General information:
TITO was launched using:
RESULT:

Template: 4JYX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain G - contact count / total energy / energy per contact / energy per residue : 1533 -147137 -95.98 -471.59
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain G : 0.85

3D Compatibility (PKB) : -95.98
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.85
QMean score : 0.485

(partial model without unconserved sides chains):
PDB file : Tito_4JYX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4JYX-query.scw
PDB file : Tito_Scwrl_4JYX.pdb: