Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKFNEIFLDLEQKILAKEYPPHSLLPSENQLIKIYGVSRETIRKALNLLTTEGYIQKKQGKGSIVLDRNRFDFPISGLTSYKELQETQRIPSETIIHTLEETEVTKALNEITGWEIGAPVWHLIRERKINGEVVILDTDYLLKEIVPILTPAQAQGSIYEYFENELSLTIAYAQKEITVEEVTEIMKTAMDLHDDTYAVVVRSLVHLEDTRCFEYSESVHRLDKFRFVEFARRRKV
2OGG Chain:A ((9-151))--------------------------------------------------------------------------------------------TKTTVHKFGLEPPSELIQKQLRANLDDDIWEVIRSRKIDGEHVILDKDYFFRKHVPHLTKEICENSIYEYIEGELGLSISYAQKEIVAEPCTDEDRELLDLRGYDHMVVVRNYVFLEDTSLFQYTESRHRLDKFRFVDFARRG--


General information:
TITO was launched using:
RESULT:

Template: 2OGG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 617 -66795 -108.26 -467.09
target 2D structure prediction score : 0.34
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -108.26
2D Compatibility (Sec. Struct. Predict.) : 0.34
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.343

(partial model without unconserved sides chains):
PDB file : Tito_2OGG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2OGG-query.scw
PDB file : Tito_Scwrl_2OGG.pdb: