Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKNFKNKVAAITGAGSGIGQQLAILLAKQGCHLSLSDINEKGLEKTVELLKPYSNITVTTKKLDVSDREAVKQWAQETVQDHGCVNLIFNNAGVALGSTVEGATYEDLEWIVGINFWGVVYGTKEFLPFIKQTQDGHIINVSSLFGLTAQPTQSGYNATKFAVRGFTESLRQELDIEKCGVSSLCVHPGGIRTNIAKAAKMSDSLSSLGMDPTKSIQNFDKLLRTPPEEAARQILDAVLKNKRRLLIGSDAKILDAFQRLFPTGYQRASTIVTKWMK
2ILT Chain:A ((21-268))--MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQ-SNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSG----I------------VHMQAAPKEECALEIIKGGALRQEEVYYDSSLWTTLLIRNPSRKILEF----------


General information:
TITO was launched using:
RESULT:

Template: 2ILT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1347 -155764 -115.64 -628.08
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -115.64
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.489

(partial model without unconserved sides chains):
PDB file : Tito_2ILT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2ILT-query.scw
PDB file : Tito_Scwrl_2ILT.pdb: