Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence----MTQVDIAALSPQVVWQHFQTLCT-IPRPSK--HEQQLREFLQNWAESRNLETYVDEVGNLIIRKNA-------------------TPGKKHVSGVILQGHLDMVTQANTGTVHDFFKDPIRPVLEEGW-LI--AKD-TTLGADNGIGV-ALALAVLDSNDIH--GPIEVLLTVDEEAGMSGARLLE-TGVLKGKWLFNIDTEEWGELYLGCAGSIDVEVEQPLNYEPIPENLNIVNIQVAGLKGGHSGVDIHLGRGNANVILARFLNQHLASLGGHLVEFTGGTARNALPREAVATIAISP-NQLSSLEKLLAEYQAAWKE--QLKGIDDNLQLSIQSTGAKVTEVINQQQQNEWLQALATSPYGVASMSQVLPDVVETSNNIGVVRLNREGGK-AILMVRSMVNQEAQDFAEKIQAHFSQFNIGSTLTPLVSGWTPNPDSAALKCLQQAYQNAFNIEPNLKVIHAGLECGIIAEHYPHLQMVSFGPDIQGAHAPGERVKVDTVEKCWKLLVTALASVE-----
3PFO Chain:A ((8-433))TKSDAITQSLRAAVDRNFNDQVAFLQRMVQFRSVRGEEAPQQEWLAQQFADRGYKVDTFSLADVDIASHPKAAPMDTIDPAGSMQVVATADSDGKGRSLILQGHIDVVP---EGPVDLWSDPPYEAKVRDGWMIGRGAQDMKGGVS-----AMIFALDAIRTAGYAPDARVHVQTVTEEESTGNGALSTLMRG------------------YRADACLI-----------PEPTGHTLTRAQV-----GAVWFRLRVR----------------------------GTPVHVAYSETGTSAILSAMHLIRAFEEYTKELNAQAVRDPWFGQVKNPIKFNVGIIKG-----------GDW--------------ASSTAAWCELDCRLGLLTGDTPQEAMRGIEKCLADAQATDSFLSENPAELVWSG------FQADPAVCEPGGVAEDVLTAAHKAAFNAPLDARLSTAVNDTRYYSV-DYGIPALCYGPYGQGPHAFDERIDLESLRKTTLSIALFVAEWCGLRKL


General information:
TITO was launched using:
RESULT:

Template: 3PFO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2024 9287 4.59 24.25
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : 4.59
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.402

(partial model without unconserved sides chains):
PDB file : Tito_3PFO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3PFO-query.scw
PDB file : Tito_Scwrl_3PFO.pdb: