Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVAQIRIGQGMDVHAFEEGKFVTLAGVQIPHTHGLKAHSDGDVVLHALCDALLGALALGDIGQHFPDTDPEFKGADSRVLLKHVYQLILDRGYHLNNADITVACERPKLAKYNLEMRQSIADVLNVDLNQISIKATTTEKLGFTGRQEGILATATVLISH
3QHD Chain:A ((24-177))----FRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHFSDTDPRFKGADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIAADLDLPLDRVNVKAKTNEKLGYLGRGEGIEAQAAALV--


General information:
TITO was launched using:
RESULT:

Template: 3QHD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 850 -121294 -142.70 -787.62
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain A : 0.83

3D Compatibility (PKB) : -142.70
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.562

(partial model without unconserved sides chains):
PDB file : Tito_3QHD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3QHD-query.scw
PDB file : Tito_Scwrl_3QHD.pdb: