Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNENPLAVKLPGLELKNPIMPASGCFGFGKEYGKYYDLNQLGSIMVKATTPNARFGNPTPRVAETPSGMLNAIGLQNPGLDVVMHKLLPELEEYNELPIIANVAGACEEDYVEVCSKIGEAPN---VKAIELNISCPNVKHGGIAFGTDSDVAFQLTQAVKKVSSVPVYVKLSPNV--TDIVPIAQAIEA-GGADGFTMINTL-LGMRIDLKTRKPILA--NQTGGLSGPAIKPVAIRLIHQVASIS-SLPIIGMGGVQTVDDVLEMFMAGASAVAIGTANFTD-PYICPKLIKELPVRMSELGIESLERLIKEVREERER
4EF8 Chain:A ((34-345))--SMSLQVNLLNNTFANPFMNAAGVMCTTTEELVAMTESASGSLVSKSCTPALREGNPTPRYQALPLGSINSMGLPNNGFDFYLAYAAEQHD-YGKKPLFLSMSGLSMRENVEMCKRLAAV-ATEKGVILELNLSCPNVPGK-PQVAYDFDAMRQCLTAVSEVYPHSFGVKMPPYFDFAHFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRCPGKLIFGCGGVYTGEDAFLHVLAGASMVQVGTALQEEGPSIFERLTSELLGVMAKKRYQTLDEFRGKVRT----


General information:
TITO was launched using:
RESULT:

Template: 4EF8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1766 -68116 -38.57 -226.30
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -38.57
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.486

(partial model without unconserved sides chains):
PDB file : Tito_4EF8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4EF8-query.scw
PDB file : Tito_Scwrl_4EF8.pdb: