Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MSELSLAYIFHHQQLLVDQNLQLPKVE--KLASD-LL--FTH---DEQVIARDLLSEEAIPEGLQLVPIRQLISNWSKEQFLQASRAVQLLEWRRNHKFCSHCGHATEVHPTEYAMVCPSCRYHQYPRVNPCIITIITKGDDEILLAKSIHNKTNMYGLIAGFVEVGETLEEAVQREALEEVGLKLKNIQYMSSQPWPFPSNLMIAFRAEYESGEISLQEDEIADAQFFKFDQLPEIPFKGSIAHAMITQITQAK 1VK6 Chain:A ((20-263)) -LDHGWWVVSHEQKLWLPKGE-LPYGEAANFDLVGQRALQIGEWQGEPVWLVQQQR------RHDMGSVRQV-IDLDVGLFQLAGRGVQLAEFYRSHKYCGYCGHEMYPSKTEWAMLCSHCRERYYPQIAPCIIVAIRR-DDSILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTSQPWPFPQSLMTAFMAEYDSGDIVIDPKELLEANWYRYDDLPLLPPPGTVARRLIEDTVAM-

General information: TITO was launched using: RESULT: Template: 1VK6.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1134 -19616 -17.30 -83.12 target 2D structure prediction score : 0.56 Monomeric hydrophicity matching model chain A : 0.77 3D Compatibility (PKB) : -17.30 2D Compatibility (Sec. Struct. Predict.) : 0.56 1D Compatibility (Hydrophobicity) : 0.77 QMean score : 0.350

(partial model without unconserved sides chains): PDB file : Tito_1VK6.pdb: (Unconserved sides chains are recalculated) : Sequence: align-1VK6-query.scw PDB file : Tito_Scwrl_1VK6.pdb: