Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNLIFLPGASGSTTFWHPLIEKLPQQYRAKIIGYPSFGDTPESL----EVKSFEDLTNYVVNQ---I-HDESVIIAQSMGGIFAVTAALQKPQLVKGLVLIATSGGINLEP--F-N---V--------------QDWREAYR-----QA-FLKYPDW----F--------IT-----TNANYEEFLSDINIKTLLIWGDNDPVSPVQVGQYLNQKFENSTLYVVKGGDHQLAEKYADEVAVQIKNYLKGLM
1WOM Chain:A ((21-270))ASIMFAPGFGCDQSVWNAVAPAFEEDHRVILFDYVGSGHSDLRAYDLNRYQTLDGYAQDVLDVCEALDLKETVFVGHSVGALIGMLASIRRPELFSHLVMVGPSPCYLNDPPEYYGGFEEEQLLGLLEMMEKNYIGWATVFAATVLNQPDRPEIKEELESRFCSTDPVIARQFAKAAFFSDHREDLSKVTVPSLILQCADDIIAPATVGKYMHQHLPYSSLKQMEARGHCPHMSHPDETIQLIGDYLKAH-


General information:
TITO was launched using:
RESULT:

Template: 1WOM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 890 -41189 -46.28 -206.98
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -46.28
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.466

(partial model without unconserved sides chains):
PDB file : Tito_1WOM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1WOM-query.scw
PDB file : Tito_Scwrl_1WOM.pdb: