Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceWYYGNVTRHQAECALNERGVEGDFLIRDSESSPSDFSVSLKASGKNKHFKVQLVDNV--YCIGQRRFHTMDELVEHY
3IMD Chain:B ((8-83))WFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKV-LRDGAGKYFLWVVKFNSLNELVDYH


General information:
TITO was launched using:
RESULT:

Template: 3IMD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 258 -13609 -52.75 -183.91
target 2D structure prediction score : 0.74
Monomeric hydrophicity matching model chain B : 0.82

3D Compatibility (PKB) : -52.75
2D Compatibility (Sec. Struct. Predict.) : 0.74
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.596

(partial model without unconserved sides chains):
PDB file : Tito_3IMD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3IMD-query.scw
PDB file : Tito_Scwrl_3IMD.pdb: