Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKGFLVSLEGPEGAGKTSVLEALLPILEEK----GVEVLTTREPGGVLIGEKIREVILDPSHTQMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWLNQFATDGLKPDLTLYFDIEVEEGLARIAANSDREVNRLDLEGLDLHKKVRQGYLSLLDKEGNRIVKIDASLPLEQVVETTNAVLFDGMGLAK
3V9P Chain:B ((23-224))-ARGKFITFEGID---KTTHLQWFCDRLQERLGPAGRHVVVTREPGGTRLGETLREILLN---QPMDLETEALLMFAGRREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDKLEALERWVQGGFQPDLTVLFDVPPQIASARRGAV--RMPDKFESESDAFFARTRAEYLRRAQEAPHRFVIVDSSEPIAQIRKQLEGVL--------


General information:
TITO was launched using:
RESULT:

Template: 3V9P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 811 -3233 -3.99 -16.58
target 2D structure prediction score : 0.75
Monomeric hydrophicity matching model chain B : 0.77

3D Compatibility (PKB) : -3.99
2D Compatibility (Sec. Struct. Predict.) : 0.75
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.550

(partial model without unconserved sides chains):
PDB file : Tito_3V9P.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3V9P-query.scw
PDB file : Tito_Scwrl_3V9P.pdb: