Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSTDIQLNLIGRTQELFVEDIQHWNNKLIEIVSSSKFLVLGGAGSIGQAVVKEIFKRNPKKLHVVDISENNLTEVVRDIRSSFGYIDGDFQTFALDIGSAEYDAYIENDGDFDYVLNLSALKHVRSEKDPFTLMRMIHVNILNTEKTIQQSIAKGVKKYFCVSTDKAA----------------NPVNMMGGSKRIMEMFLMRQSQ--YIDISTARFANVAFSDGS------LLHGFNQRIQKNQPIAAP--NDIRRYFVTPKESGELCLMSCLLGENRDIFFPKLSEHLHLITFADIAVKYLNNLGYEPYLCESEDEARSLIQTLPKQGKWPCLFAGSTTTGEKDFEEFFTDNETLDMQRFNNLGVIKNELNIEEDKLQVFEEKINSMLLSKHWNKEEIVDLFNYMMPNFGHKETGLYLDGKM
4ZRM Chain:B ((3-261))---------------------------------HMNILVTGGAGFIGSHVVDKLIENG-YGVIVVDNLSSGKVE---NLN-------RNALFYEQSIEDEEMMERIFSLHRPEYVFHLAAQASVAISVR--EPARDAKTNIIGSLVLLEKSIKYGVKKFIFSSTGGAIYGENVKVFPTPETEIPHPISPYGIAKYSTEMYLEFFAREYGLKYTVLRYANVYGPRQDPYGEAGVVAIFTERMLRGEEVHIFGDGEYVRDYVYVDDVVRANLLAMEKG-DNEVFNIGTGRGT---TVNQLFKLLKEITGYD-------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4ZRM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1222 -68721 -56.24 -294.94
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain B : 0.62

3D Compatibility (PKB) : -56.24
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.430

(partial model without unconserved sides chains):
PDB file : Tito_4ZRM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ZRM-query.scw
PDB file : Tito_Scwrl_4ZRM.pdb: