Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKNKVILSISLAAALLFAAGCSANNTTSSSSSTESSKSTSTAESTTASSVDLNALELPQLTKDVAENEDLVEMVTNKGTIKIKLFPEYAPKAVENFMTHAKDGYYNGLTFHRVIKDFMIQGGDPKGDGTGGESIWGEGFETEINNHL-YNIRGALSMARSQDPNSNGSQFFIVQNTDDMHDGLLKDDYPQAIIDAYKNGGYPSLDGHYTVFGQVIEGMDVVDA--IANIETDSSDKPKEEVKIDKINILQEAKQK
4R3E Chain:A ((17-169))-----------------------------------------------------------------------VLLKTTAGDIDIELWSKEAPKACRNFIQLCLEAYYDNTIFHRVVPGFIVQGGDPTGTGSGGESIYGAPFKDEFHSRLRFNRRGLVAMANAGS-HDNGSQFFFTLGRAD------------------------ELNNKHTIFGKVT-GDTVYNMLRLSEVDIDDDERPHNPHKIKSCEVL------


General information:
TITO was launched using:
RESULT:

Template: 4R3E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 791 -35962 -45.46 -239.74
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : -45.46
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.468

(partial model without unconserved sides chains):
PDB file : Tito_4R3E.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4R3E-query.scw
PDB file : Tito_Scwrl_4R3E.pdb: