Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMNLSNRFSPRLSRIEVSKIRQFDQQISSIPDVIKLTLGEPDFPTPEHVKQAGIAAIE-EDFSHYTGMRGLEELREAACIFQQQRYGLTYDPQTEVLTTVGATEAIASALLSVLEEGDKVLIPAPAYSGYQPLVELAGAELIPIDTSD----------TGFVCQPEQFERAFEQYGSAVKAVILNYPNNPTGTTLSAKQLKAIAEVLKKYPVFVISDEVYAELTYSGT-HMSIATY--LPEQTIVISGLSKSHAMTGWRVGFIFAQKALIDELIKVHQYLVTAATTMSQKAAAEAL-IN------GVKDSENMKEQYQTRRDYLVQQLAPLGFEVTQPNGAFYLFCKLPAAI------QT---DSWQFCVELAEQAKVACIPGIAFGPE-----GEGYIRISYASSMEKLHEACKRIKDFLTEQ
3E2Y Chain:B ((2-410))--------AKRIEGLDSNVWVEFTK-LAADPSVVNLGQGFPDISPPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKF---SSKTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGWSIGPAHLIKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLNSVGLKPIVPDGGYFIIADVSSLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLVRFCFIKKDSTLDAAEEIFRAWN---


General information:
TITO was launched using:
RESULT:

Template: 3E2Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1993 -46999 -23.58 -125.66
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain B : 0.76

3D Compatibility (PKB) : -23.58
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.553

(partial model without unconserved sides chains):
PDB file : Tito_3E2Y.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3E2Y-query.scw
PDB file : Tito_Scwrl_3E2Y.pdb: