Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIDLYYWGTPNGHKITIALEEMGLDYTLYPINILENDQFQPDFLKISPNNKIPAIVDQDG---PRGEPISVFESGAILQYLGRKTGL----FYPTDEQERVEVEQWLMWQMGGLGPMLGQNHHFNRFAPEKIPYAIDRYVNETKRLYGVLNKQLI-----RQKFVAGE-YSIADMAILPWILRYEWQGIQLEDYPYVQEYIVRLTARPAVQKALSIKVI
4IVF Chain:F ((7-220))PIKLYTAPTPNGYKISIFLEVLGLDYEVQKFDLSKNETKEDWFVKLNPNGRIPTINDPNFKGVDGG--LVLSQTGAILQYLADTYDKEHKFSYPAGTAEYYKTLEYLIFQVAENGPIQGQANHFVFAAKEKVPYGINRYITDTKRIYGVFEDILSRNKANDSKYLVGDRYTVADFALLGWAYRLSRLEIDINQWPLLGKWYDSLLKLPAVQKGFEV---


General information:
TITO was launched using:
RESULT:

Template: 4IVF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain F - contact count / total energy / energy per contact / energy per residue : 907 -55783 -61.50 -277.53
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain F : 0.80

3D Compatibility (PKB) : -61.50
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.529

(partial model without unconserved sides chains):
PDB file : Tito_4IVF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4IVF-query.scw
PDB file : Tito_Scwrl_4IVF.pdb: