Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRMHLPTLLKNKEKSQRSRQMSSSKTIGIIGGGQLGQMMAISAIYMGHKVIALDPAADCPASRVA-EIIVAPYNDVDALRQLADRCDVLTYEFENVDADGLDAVIK-DGQLPQGTDLLRISQNRIFEKDFLSNKSQVTVAPYKVVTSSLDLADI--DLSKNYVLKTATGGY-DGHGQKVIRSEADLEAAYALADSADCVLEEFVNFDLEISVIVSGN-GKEVTFFPVQENIHRNNILSKTIVPARISESLVDKAKAMAVRIAEQLNLSGTLCVEMFATDD-DVIVNEIAPRPHNSGHYSIEACDFSQFDTHILGVLGAPLPVIKLHAPAVMLNVLGQ--HVEAAEQYVTENSSAHLHMYGKIEAKHNRKMGHVTLFSDVPDSVDELGEGIDF
4DLK Chain:B ((3-370))------------------RIILPGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKNSPCAQVADIEIVASYDDLKAIQHLAEISDVVTYEFENIDYRCLQWLEKHAYL-PQGSQLLSKTQNRFTEKNAIE-KAGLPVATYRLVQNQEQLTEAIAELSYPSVLKTTT-GGYDGKGQVVLRSEADVDEARKLANAAECILEKWVPFEKEVSVIVIRSVSGETKVFPVAENIHVNNILHESIVPARITEELSQKAIAYAKVLADELELVGTLAVEMFATADGEIYINELAPRPHNSGHYTQDACETSQFGQHIRAICNLPLGETNLLKPVVMVNILGEHIEGVL--RQVNRLTGCYLHLYGKEEAKAQRKMGHVNILNDNIEVALEKAKSLH-


General information:
TITO was launched using:
RESULT:

Template: 4DLK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 2088 30464 14.59 84.86
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain B : 0.82

3D Compatibility (PKB) : 14.59
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.509

(partial model without unconserved sides chains):
PDB file : Tito_4DLK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4DLK-query.scw
PDB file : Tito_Scwrl_4DLK.pdb: