Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMSWTFDNKKPIYLQIMEKIKLQIVSHTLEPNQQLPTVRELASEAGVNPNTIQRALSDLEREGFVYSKRTTGRFVTKDKELIAQSRKQLSEEELEHFVSSMTHFGYEKEELPGVVSDYIKGV
3BY6 Chain:E ((3-120))-AMAITQKRPVYLQLVDRIKNEVATDVLSANDQLPSVRETALQEKINPNTVAKAYKELEAQKVIRTIPGKGTFITGNTASVKNSNQNRLLADLSQVIAELIKSGVKGERIKKIVNDILG--


General information:
TITO was launched using:
RESULT:

Template: 3BY6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 326 -37965 -116.46 -321.73
target 2D structure prediction score : 0.82
Monomeric hydrophicity matching model chain E : 0.81

3D Compatibility (PKB) : -116.46
2D Compatibility (Sec. Struct. Predict.) : 0.82
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.659

(partial model without unconserved sides chains):
PDB file : Tito_3BY6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3BY6-query.scw
PDB file : Tito_Scwrl_3BY6.pdb: