Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDKTIGIFGGGQLGRMMAQAALPLNIQCTFFEANTDCPAGVLG---QVFSSQDEQGLKQFIESADVFSLEFENTPVADVDVLTQT-KTLHPPRIALATAQNRLSEKALFDELAIPVAPYRAVDSLESLKKAVAELGLPIVLKTATGGY-DGKGQFVLRSEDQIDTAWAELGPAKSLVAESFVKFS-CEVSIIAVRGQNGEVKTWPLAENHHHNGILSHSIVPAPNSEALQPVAQDYITRLLNHLNYVGVLTLELFVTEQ-GLCANEMAPRVHNSGHWSIEGAVCSQFENHIRAVAGLPLGSTDVVRPTVMINIIG--QHPKTKDVLALNGAHLHLYNKSE-RAGRKLGHITLMPVDSNELTNLCRQLAKILPEPLALTDDMTI
4DLK Chain:B ((7-374))PGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKNSPCAQVADIEIVASYDDLKAIQHLAEISDVVTYEFENIDYRCLQWLEKHAYLP-QGSQLLSKTQNRFTEKNAIEKAGLPVATYRLVQNQEQLTEAIAELSYPSVLKTT-TGGYDGKGQVVLRSEADVDEARKLANA-AECILEKWVP-FEKEVSVIVIRSVSGETKVFPVAENIHVNNILHESIVPARITEELSQKAIAYAKVLADELELVGTLAVEMFATADGEIYINELAPRPHNSGHYTQDACETSQFGQHIRAICNLPLGETNLLKPVVMVNILGEHIEGVLRQVNRLTGCYLHLYGKEEAKAQRKMGHVNILNDNIEVALEKAKSLHIWDH-----------


General information:
TITO was launched using:
RESULT:

Template: 4DLK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 2085 15129 7.26 42.26
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain B : 0.79

3D Compatibility (PKB) : 7.26
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.501

(partial model without unconserved sides chains):
PDB file : Tito_4DLK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4DLK-query.scw
PDB file : Tito_Scwrl_4DLK.pdb: