Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKDTIIALHAEHQGRWKNREEIAERMIALIGQLYREKNIVVSVYGRSLINRSVIQILKTHRRTRVVDVELSVVNTFPILEALAKVENIGSAEVDIGKLAVEYKEKGGDVDAFVAQAVESIKGSATSEQPKDVVLYGFGRIGRILARLIISQSGLGRGLSLKAIVVRKSSDGDLAKRASLLRRDSIHGTFAGTISVDEENEAIIANGNFIKVIYASSPSEVDYTQYGIENALLIDNTGKWRDAEGLSQHLKCPGVARVVLTAPSKGE-MKNVVFGVNNSDILDED-KIISAASCTTNAITPILKVLDDKYKVLNGHVETVHSFTNDQNLIDNYHKADRRGRAATLNMVITETGAAKAVAKALPALKGKLTGNSVRVPTPNVSLAILNLTLDKEVDREEVNEYIRQISINSNLQGQIGYTNSTEVVSSDFIGSRTAGVYDAQAT-ITSGNRLTAYVWYDNEVGYSCQVLRIAEQMCGVSYKKIPAETNA
3B20 Chain:O ((5-331))------------------------------------------------------------------------------------------------------------------------------------VAINGFGRIGRNFLRCWFGR----QNTDLEVVAINNTSDARTA--AHLLEYDSVLGRFNADISYDEN--SITVNGKTMKIVCDRNPLNLPWKEWDID--LVIESTGVFVTAEGASKHIQA-GAKKVLITAPGKGEGVGTYVIGVNDSEYRHEDFAVISNASCTTNCLAPVAKVLHDNFGIIKGTMTTTHSYTLDQRILDASHRDLRRARAAAVNIVPTTTGAAKAVALVIPELKGKLNGIALRVPTPNVSVVDLVVQVEKPTITEQVNEVLQKAS-QTTMKGIIKYSD-LPLVSSDFRGTDESSIVDSSLTLVMDGDLVKVIAWYDNEWGYSQRVVDLAE----------------


General information:
TITO was launched using:
RESULT:

Template: 3B20.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain O - contact count / total energy / energy per contact / energy per residue : 1892 -78261 -41.36 -241.54
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain O : 0.74

3D Compatibility (PKB) : -41.36
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.511

(partial model without unconserved sides chains):
PDB file : Tito_3B20.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3B20-query.scw
PDB file : Tito_Scwrl_3B20.pdb: