Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQNKQEQWTVLKRLMSYLKPYGLLTFLALSFLLATTVIKSVIPLVASHFIDQYLSNLNQLAVTVLLVYYGLYILQTVVQYVGNLLFARVSYSIVRDIRRDAFANMEKLGMSYFDKTPAGSIVSRLTNDTETISDMFSGILSSFISAVFIFLTTLYTMLVLDFRLTALVLLFLPLIFLLVNLYRKKSVKIIEKTRSLLSDINSKLAENIEGIRIIQAFNQEKRLQAEFDEINQEHLAYANRSVALDALFLRPAMSLLKLLGYAVLMTYFGYRGLSIGITAGTMYAFIQYINRLFDPLIEVTQNFSTLQTSMVSAGRVFALIDERTYEPLQENGQAKVKEGNIRFEHVCFSYDGKHP----ILDDISFSVNKGETIAFVGHTGSGKSSIINVLMRFYEFQSGRVLLDDVDIRD--FSQEELRKNIGLVLQEPF--LYHGTI-------KSNIAMYQEISDEQVQAAAAFVDADSFIQELPQGYDSPVSERGSSFSTGQRQLLAFARTVASQPKILILDEATANIDSETESLVQASLAKMRQ-----GRTTIAIAHRLSTI-QDANCIYVLDKGRIIESGTHEELLTLGGTYHKMYSLQAGAMAYTL
4MKI Chain:A ((7-235))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IKVENVSFIYNEGTPYATVALKDINFSIDDEEFVGIIGHTGSGKSTLIQQLNGLLKPSKGKIYINGIDITDKKVSLKDIRKQVGLVFQYPEYQLFEETVFKDIAFGPSNLGLSEEEVKERVYEAMEIVGISKELAD-----KSPF-----ELSGGQKRRVAIAGILAMRPKILILDEPTAGLDPKGK---QEILNKIKEIHDKYKMITILVSHNMEDIARIADKIIVMNRGKIELIGTPREV----------------------


General information:
TITO was launched using:
RESULT:

Template: 4MKI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 971 26142 26.92 125.68
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain A : 0.56

3D Compatibility (PKB) : 26.92
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.56
QMean score : 0.534

(partial model without unconserved sides chains):
PDB file : Tito_4MKI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4MKI-query.scw
PDB file : Tito_Scwrl_4MKI.pdb: