Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKLISWNIDSLNAALTSDSARAKLSQEVLQTLVAENADIIAIQETKLSAKGPTKKHVEILEELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAPSTMDLEGRIITLEFDAFFVTQVYTPNAGDGLKRLEERQVWDAKYAEYLAELDKEKPVLATGDYNVAHNEIDLANPASNRRSPGFTDEERAGFTNLL-ATGFTDTFRHVHGDVPERYTWWAQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGARQDHTPIVLEIDL
1DE8 Chain:A ((20-276))LKICSWNVDGLRAWIK---------KKGLDWVKEEAPDILCLQETKCSENKLPA----ELQE-LPGLSHQYWSAP-SDKEGYSGVGLLSRQCP-LKVSYGIG--DEEHDQEGRVIVAEFDSFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNA-RSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLAL


General information:
TITO was launched using:
RESULT:

Template: 1DE8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1467 -97661 -66.57 -381.49
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.80

3D Compatibility (PKB) : -66.57
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.452

(partial model without unconserved sides chains):
PDB file : Tito_1DE8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1DE8-query.scw
PDB file : Tito_Scwrl_1DE8.pdb: