Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRPTVLCFSGLDPSGGAGLQADIEAIGQSGAHAAIACTALTIQNSQQVFGSEATSKELLLAQANAVVGDLPIKCVKSGMLGTTDNIAALAEFLRAHPDYQYVLDPVLVANSGGSLGDQATLVKAFVELIL-LATLITPNTVELRALTGVT------DLDQATQKLFEMGAKAVLVKGGHEDTPDFIKNSLYIDGELAASSTCPRLE-GEYHGSGCSLASFIAGRLALGDSLKIAVQHAETWLFGVLKNAETPV-PNGQKIPKRF
1JXI Chain:B ((25-283))-RINALTIAGTDPSGGAGIQADLKTFSALGAYGCSVITALVAENTCGVQSVYRIEPDFVAAQLDSVFSDVRIDTTKIGMLAETDIVEAVAERLQRHHVRNVVLDTVMLAKSGDPLLS-PSAIETLRVRLLPQVSLITPNLPEAAALLDAPHARTEQEMLAQGRALLAMGCEAVLMKG----------DWLFTRE-GEQRF---RVNTKNTHGTGCTLSAALAALRPRHRSWGETVNEAKAWLSAALAQADTLEVGKGIGPVHH-


General information:
TITO was launched using:
RESULT:

Template: 1JXI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1339 -88117 -65.81 -370.24
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain B : 0.77

3D Compatibility (PKB) : -65.81
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.536

(partial model without unconserved sides chains):
PDB file : Tito_1JXI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1JXI-query.scw
PDB file : Tito_Scwrl_1JXI.pdb: