Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVFCFRLDKKEESAMAEIRIGHSQVYAEQLGLGANAVGGHNLFDGLEDE-TGKQVVRTALNSGINLIDTAYAYGNGRSEELIGEVLKE-KEYDRSRVVIATKAAHVPNKGRTFDNSPEFLKQSVEDALKRLQTDYIDIFYIHFPDESTPKNESVATLHELKEAGKIRAVGVSNFTLEQLKEANA----DGY--VDVVEDKYSLIHRQA-EKELFPYLEKNKISFVPYFPLASGLLTGKYELGEEKQFGEGDPRKRNPDF-------QGERFREILTAVDVLRPIAKRYQATPAQLVLAWYMKNPRVSVVIPGAKRPEQVSDNVQALDL--HLSNEDYQTIDEAFRGF
1QRQ Chain:C ((2-322))--------------QFYRNLGKSGLRVSCLGLGTWVTFGG-----QITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWR-RSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDSGIPP---Y--SRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNAEQLMENIGAIQVLPKLSSSIVHEIDSILGN-


General information:
TITO was launched using:
RESULT:

Template: 1QRQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1760 24180 13.74 79.80
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain C : 0.72

3D Compatibility (PKB) : 13.74
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.578

(partial model without unconserved sides chains):
PDB file : Tito_1QRQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1QRQ-query.scw
PDB file : Tito_Scwrl_1QRQ.pdb: