Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEHTWKIGNVEIPNRVVVAPMAGITNSAFRVTVKE-FGAGLVVCEMISDQGIHFRNKKTLEM------LHIEETEHPLSLQIFGGNKDSLVEAAQFV-EENTAADIIDINMGCPVNKVIKAEAGAKWLLDPEKVYEMVQAVSSAV--NIPVTIKMRIGWDEEHVFAVENALAAQSAGASAIAMHGRTRVQMYEG-KADWEVLKEVKKHLTIPFMGNGDVKTPEDAKWMLDYVGADGVMIGRAALGNPWMIHRTQHYLETGELIPEPTPAEKIATAKLHLQRLADLKGEKVACREFRTHAAYYLKGIPRAAKVKVAINQTEKQQEINDLLDQFVEKAEKVLLKQTL
4YCO Chain:C ((6-318))------------SMRVLLAPMEGVLDSLVRELLTEVNDYDLCITEFVRVVDQLLPVKVFHRICPELQNASRTPSGTLVRVQLLGQFPQWLAENAARAVE--LGSWGVDLNCGAPS----GSGGGATLLKDPELIYQGAKAMREAVPAHLPVSVKVRLGWDSG-EKKFEIADAVQQAGATELVVHGRTKEQGYRAEHIDWQAIGDIRQRLNIPVIANGEIWDWQSAQQCMAISGCDAVMIGRGALNIPNLSRVVKYNEPRM-----PW-PEVVALLQKYTRLEKQGDTGLYHVARIKQWLSYLRKEYDEATELFQHVRVLNNSPDIARAIQAIDI-----------


General information:
TITO was launched using:
RESULT:

Template: 4YCO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1689 33015 19.55 110.79
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain C : 0.70

3D Compatibility (PKB) : 19.55
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.489

(partial model without unconserved sides chains):
PDB file : Tito_4YCO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YCO-query.scw
PDB file : Tito_Scwrl_4YCO.pdb: