Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEPIIELEKINYKYQPDDLRPALKDVSFTIDKGEWIAIIGHNGSGKSTLAKTINGLLLPESG--IVKVGNQILDEENIWTIRQMVGMVFQNPDNQFVGSTVEDDVAFG-LENQGIPREEMLVRVKDALEKVRMAEFASREPARLSGGQKQRVAIAGVVALRPDIIILDEATSMLDPEGREEVISTIKKIKEESQLTVISITHDIDEAAN-ANRILVMRQGELVREGTPKEIFSAGPELIDLGLDLPFPEKLKSALKERGVDVPSEYMTEERMVDWLWTSVLNK
3C4J Chain:A ((40-247))----------------------LKGINVHIREGEVVVVIGPSGSGKSTFLRCLNLLEDFDEGEIIIDGINLKAKDTNLNKVREEVGMVFQR-FNLFPHMTVLNNITLAPMKVRKWPREKAEAKAMELLDKVGLKDKAHAYPDSLSGGQAQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLSVMKQLANEG-MTMVVVTHEMGFAREVGDRVLFMDGGYIIEEGKPEDLF---------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3C4J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1012 -23324 -23.05 -114.33
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : -23.05
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.489

(partial model without unconserved sides chains):
PDB file : Tito_3C4J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3C4J-query.scw
PDB file : Tito_Scwrl_3C4J.pdb: