Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMENLKKMAGIKAAEFVSDGMVVGLGTGSTAYYFVEEIGRRIKEEGLQITAVTTSSVTTKQAEGLNIPLKSIDQVDFVDVTVDGADEVDSQFNGIKGGGGALLMEKVVATPSKEYIWVVDESKLVEKLGAFKLPVEVVQYGAEQVFRHFE----RAG--YKPSFREKDGQRFVTDMQNFIIDLALDVIENPIAFGQELDHVVGVVEHGLFNQMVDKVIVAGRD-GVQISTSKKGK
3HHE Chain:B ((25-251))-QQLKKMAALKALEFVEDDMRLGIGSGSTVNEFIPLLGERVANG-LRVTCVATSQYSEQLCHKFGVPISTLEKIPELDLDIDGADEIGPEMTLIKGGGGALLHEKIVASASRAMFVIADETKMVKTLGAFALPIEVNPFGIHATRIAIEKAADNLGLSGEITLRMNGDDPFKTDGGHFIFDAFWGRILQPKLLSEALLAIPGVVEHGLFLGLASRAIVAMADSQIKVLE-----


General information:
TITO was launched using:
RESULT:

Template: 3HHE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1257 -104461 -83.10 -474.82
target 2D structure prediction score : 0.46
Monomeric hydrophicity matching model chain B : 0.80

3D Compatibility (PKB) : -83.10
2D Compatibility (Sec. Struct. Predict.) : 0.46
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.394

(partial model without unconserved sides chains):
PDB file : Tito_3HHE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3HHE-query.scw
PDB file : Tito_Scwrl_3HHE.pdb: