Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMHYDASYISFDGILRKEILMTLLDVKHVQKIYKTRFQGNQVEA--LKDIHFTVEKGDYVAIMGESGSGKSTLLNILAMLDKPSRGQVYLNGTDTATIKNSQASSFRREKLGFVFQDFNLLDTLSVKDNILLPLVLSRRPIT---EMMKKLVVTAENLGINQLQEKYPYEI-------SGGQKQRVAVARAIITEPEILLADEPTGALDSKSSAALLDVFDEINERGQTILMVTHSTAAASRAKRVLFIKDGILYNQIYRGEKTERQMFQEISDTLTVMASEVN
2HYD Chain:A ((340-551))----------------------IDIDHVS------FQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHN---IKDFLTGSLRNQ-IGLVQQD-NILFSDTVKENILLG-----RPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLS-KDRTTLIVAHRLSTITHADKIVVIENG--------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2HYD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 975 24862 25.50 124.31
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : 25.50
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.516

(partial model without unconserved sides chains):
PDB file : Tito_2HYD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2HYD-query.scw
PDB file : Tito_Scwrl_2HYD.pdb: