Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MNAIPTLTPLAMPCNSSF-EAKDW-------EILSSHWYPVARIQDVSTA-PQRVKLLDVNMALYKTESGEIHLVRDICPHRGVPLTKGWVD--GEEIVCPYHGLRYNT-EGKCTQIPAQPELTKISDRFSLTKFPVVQRYGLIWTSIHGRDIAK--ANIPVLDTWDDAEHQAILPPFVDIGGSSGRQLEGFIDVAHFAWVHHNAFANRDNPIVPKYHTER-TNYGLKTVYISNVSNY-P---HE------LKH---L------EPEGFLWKRTFEVYPPFSAVLTVDFPEDGILKILNACCPISSNKTRLFVPLTRNFDQTGD--------LEKVYAFNAQIF-AEDQDMVESQKPEELPL-DLMMEAHFEADRSSTTYRRILAEWGLSKRYTV 3GKQ Chain:B ((8-380)) -------------AGIAERRTRAWAPYIDAKLGFRNHWYPVRLSAEVAEASPVPVQLLGEKVLLNRV-DGVVHAIADRCLHRGVTLSDKVECYSKATISCWYHGWTYRWDNGKLVDILTNPTS-VQIGRHALKTYPVREEKGLVFLFVGDQEPHDLAEDVP--PGFLDADLAVH-GQHRVVDANWRMGVENGFDAGHV-FIHKSSILLDGNDIALPLGFAPGDPEQLTRSVTGEGAPKGVFDLLGEHSVPIFEATIEGQPAIQGHMGSKMVAISISVWLPGVLKVDPFPD--PTLTQFEWYVPIDEGHHLYLQMLGRRVGSEEEARSFEAEFREKWVELALNGFNDDDILARRSMEPFYADDRGWREEVLFESDRAIIEWRRLASQYNRGIQTR-

General information: TITO was launched using: RESULT: Template: 3GKQ.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1651 28323 17.15 86.09 target 2D structure prediction score : 0.61 Monomeric hydrophicity matching model chain B : 0.65 3D Compatibility (PKB) : 17.15 2D Compatibility (Sec. Struct. Predict.) : 0.61 1D Compatibility (Hydrophobicity) : 0.65 QMean score : 0.339

(partial model without unconserved sides chains): PDB file : Tito_3GKQ.pdb: (Unconserved sides chains are recalculated) : Sequence: align-3GKQ-query.scw PDB file : Tito_Scwrl_3GKQ.pdb: