Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNQKYQIKLSQLIKGCFIYAIANYALAQPIVVEGVVPNEASKQAILMKMQSVYGADQVVDKIQVRPVAAPNGWSDSVTRVITPDLKKVSQGKLSVNGTRFELTGKMLNPTEIQPTIQSFQSLVQPPYQLFSQLSVNQAEQKIIDDALKNRIIEFESGSAVLTEAGQKILDEMAVALNKVGGK--KVKIVGHTDSSGDATKNLKLSQDRALAVKNYLISKNIPADHLSTEGLGSSKPVADNTSAEGRKK---------NRRIEFTVL
4ERH Chain:B ((19-137))-------------------------------------------------------------------------------------------------------------------------------------------------TLKSDVL-FNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSEKRAQSVVDYLISKGIPSDKISARGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIEV-


General information:
TITO was launched using:
RESULT:

Template: 4ERH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 349 14736 42.22 136.44
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain B : 0.62

3D Compatibility (PKB) : 42.22
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.618

(partial model without unconserved sides chains):
PDB file : Tito_4ERH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ERH-query.scw
PDB file : Tito_Scwrl_4ERH.pdb: