Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKQEKLALVESALEDFYGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVAIKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDPYALIAQADL-PSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQ--HLSLEELQTIHANKTGKLLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDVTASFEEIGKTPQKDLQAEKSTYPALLGLEESIAFCNQTLDQANEKLEEIAQQVPFETESIVSVVESLRING
3M0G Chain:B ((9-272))----EVQDAVETAMAAAIGRL-PAGDLRDAMAYAA-QGGKRLRAFLAIESAAIHGISMAQA-MPAALAVEALHAYSLVHDDMPCMDNDDLRRGLPTVHKKWDDATAVLAGDALQTLAFELCTDPVLGSAENRVALVAALAQASGAEGMVYGQALDIAAETAAVPLTLDEIIRLQAGKTGALISFAAQAGAILAGADR---GPLTAYATALGLAFQIADDILDV------------------KATFVSLLGLAGAKSRAADLVAEAEAALAPYGE--------------------


General information:
TITO was launched using:
RESULT:

Template: 3M0G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1209 -96163 -79.54 -395.73
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain B : 0.77

3D Compatibility (PKB) : -79.54
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.532

(partial model without unconserved sides chains):
PDB file : Tito_3M0G.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3M0G-query.scw
PDB file : Tito_Scwrl_3M0G.pdb: