Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKFNELNLSADLLAEIEKAGFVEASPIQEQTIP--LALEGKDVIGQAQTGTGKTAAFGLPTLEKIRT----EEATIQALVIAPTRELAVQSQEEL-----FRFGRSKGVKVRSVYGGSSIEKQIKAL-KSGAHIVVGTPGRLLDLIKRKALKL-QDIETLILDEADEMLNMGFLEDIEAII-------SRVPENRQTLLFSATMPDAIKRIGVQFMKAPEHVKIAAKELT----TELVDQYYIRVKEQEKF-DTMTRLMDVAQPEL--------AIVFGRTKRRVDELTRGLKIRGFRAE----GIHGDLDQNKRLRVLRDFKNGNLDVLVATDVAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKSGQSITFVAPNEMGYLQIIENLTKKRMKGLKPASVEESFQSKKQVALKKIERDFADETIRANFEKFGKDARKLAAEFTPEELAMYILSLTVQDPDSLPEVEIAREKPLPFKPSGNGFGGKAKGGRGGRRGDDRRERDRRGNGRRDEFKKGSRGNDRFDKEKRYRKDNKKPRNTLSEKQTGFVIRNKGDK
3SQW Chain:A ((28-408))-------LDKEIHKAITRMEFPGLTPVQQKTIKPILSSEDHDVIARAKTGTGKTFAFLIPIFQHLINTKFDSQYMVKAVIVAPTRDLALQIEAEVKKIHDMNYGLKKYACV-SLVGGTDFRAAMNKMNKLRPNIVIATPGRLIDVLEKYSNKFFRFVDYKVLDEADRLLEIGFRDDLETISGILNEKNSKSADNIKTLLFSATLDDKVQKLANNIMNKKECLFLDTVDKNEPEAHERIDQ---SVVISEKFANSIFAAVEHIKKQIKERDSNYKAIIFAPTVKFTSFLCSILK-NEFKKDLPILEFHGKITQNKRTSLVKRFKKDESGILVCTDVGARGMDFPNVHEVLQIGVPSELANYIHRIGRTARSGKEGSSVLFICKDELPFVRELED------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3SQW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1742 90741 52.09 263.78
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : 52.09
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.502

(partial model without unconserved sides chains):
PDB file : Tito_3SQW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3SQW-query.scw
PDB file : Tito_Scwrl_3SQW.pdb: