Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEAQYKVLCVCLGNICRSPTAEVVFRHYCDQHQLNIIVDSARTSNYHPNKAPDQRSQLHAKKRGYDLSSLRARQLSTQDFLDFDLILAMDHQNFDDIHDLLQRAIFQFGSHQIRAKVALMSEHDPQYPQQALPDPYYGGDEGFERVLDQCESSALAWINILKKQLNV
1P8A Chain:A ((2-145))-AEKKAVLFVCLGNICRSPACEGICRDMVGD---KLIIDSAATSGFHVGQSPDTRSQKVCKSNGVDISKQRARQITKADFSKFDVIAALDQSILSDINSMKPSNC--------RAKVVLFNP------PNGVDDPYYSS-DGFPTMFASISKEMKPFLTEHGL----


General information:
TITO was launched using:
RESULT:

Template: 1P8A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 757 -83092 -109.76 -577.03
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -109.76
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.326

(partial model without unconserved sides chains):
PDB file : Tito_1P8A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1P8A-query.scw
PDB file : Tito_Scwrl_1P8A.pdb: