Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEMMMKSIKHLAFPLLSAALVMTGCASRKPATTATTGTTNPSTVNTTGLSEDAALNAQNLAGASSKGVTEANKAALAKRIVHFDYDSSDLSTEDYQTLQAHAQFLMANANSKVALTGHTDERGTREYNMALGERRAKAVQNYLITSGVNPQQLEAVSYGKEAPVNPGHDESAWKENRRVEINYEAVPPLLK
4PWT Chain:B ((20-131))-----------------------------------------------------------------------MQELQKNNIVYFGFDKYDIGSDFAQMLDAHAAFLRSNPSDKVVVEGHADERGTPEYNIALGERRASAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAFAKNRRAVLVY--------


General information:
TITO was launched using:
RESULT:

Template: 4PWT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 492 -24998 -50.81 -223.19
target 2D structure prediction score : 0.78
Monomeric hydrophicity matching model chain B : 0.67

3D Compatibility (PKB) : -50.81
2D Compatibility (Sec. Struct. Predict.) : 0.78
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.565

(partial model without unconserved sides chains):
PDB file : Tito_4PWT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4PWT-query.scw
PDB file : Tito_Scwrl_4PWT.pdb: