Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFISFEGTEGVGKTTLIRKIHQHFEEQGKQVVLTREPGGTPLAEQIRSMLLAVNHDENMSHDTELLLIYAARAQHLQQVILPALESNKIVLSDRFTDASFAYQCSGRGLSQDKLQLLNQNFVSR--MPEVTFWLDAPIELGMNRARERGALDRFEQEKLSFFTKVREGYETLWKAEPERIKRLDATQSPDQVFEQALQYLA
3HJN Chain:B ((1-181))MFITFEGIDGSGKSTQIQLLAQYLEKRGKKVILKREPGGTETGEKIRKILL----EEEVTPKAELFLFLASRNLLVTE-IKQYLSEGYAVLLDRYTDSSVAYQGFGRNLGKEIVEELN-DFATDGLIPDLTFYIDVDVETALKR-------NRF--EKREFLERVREGYLVLAREHPERIVVLDGKRSIEEI---------


General information:
TITO was launched using:
RESULT:

Template: 3HJN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 852 -11987 -14.07 -68.49
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain B : 0.80

3D Compatibility (PKB) : -14.07
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.470

(partial model without unconserved sides chains):
PDB file : Tito_3HJN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3HJN-query.scw
PDB file : Tito_Scwrl_3HJN.pdb: